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Read an .h5ad file and create a SingleCellExperiment.

Source: R/read_h5mu.R
readH5AD.Rd

In file-backed mode, the main X matrix is not read into memory, but references the HDF5 file and its required parts are read on demand. This requires the HDF5Array package to be installed.

Usage

readH5AD(file, backed = FALSE)

Arguments

file

Path to the .h5ad file.

backed

Whether to use file-backed mode.

Value

A SingleCellExperiment.

Examples

data(miniACC, package="MultiAssayExperiment")
writeH5AD(miniACC[[1]], "miniacc.h5ad")
sce <- readH5AD("miniacc.h5ad")